# CNS 1.1 script
# type prepare cns
# to run locally, type cns.com
# to run in the Alpha Linux queues, type alin256 cns.com
# visit CNS 1.1 Main Page
#
# change the following line to reflect the location of your CNS files

#!/bin/csh -f
cd $HOME/directory containing cns files/
source /home/public.Linux.alpha/apps/cns_solve_1.1/cns_solve_env
set d1 = "`date +'%d%m%y%H%M%S'`"
set d2 = "`echo 'filename.'$d1'.out'`"
cns_solve < filename.inp > $d2